A novel nonlinear time-varying sigmoid transfer function in binary whale optimization algorithm for descriptors selection in drug classification

Norfadzlia Mohd Yusof, Azah Kamilah Muda, Satrya Fajri Pratama, Ajith Abraham

Research output: Contribution to journalArticlepeer-review

Abstract

In computational chemistry, the high-dimensional molecular descriptors contribute to the curse of dimensionality issue. Binary whale optimization algorithm (BWOA) is a recently proposed metaheuristic optimization algorithm that has been efficiently applied in feature selection. The main contribution of this paper is a new version of the nonlinear time-varying Sigmoid transfer function to improve the exploitation and exploration activities in the standard whale optimization algorithm (WOA). A new BWOA algorithm, namely BWOA-3, is introduced to solve the descriptors selection problem, which becomes the second contribution. To validate BWOA-3 performance, a high-dimensional drug dataset is employed. The proficiency of the proposed BWOA-3 and the comparative optimization algorithms are measured based on convergence speed, the length of the selected feature subset, and classification performance (accuracy, specificity, sensitivity, and f-measure). In addition, statistical significance tests are also conducted using the Friedman test and Wilcoxon signed-rank test. The comparative optimization algorithms include two BWOA variants, binary bat algorithm (BBA), binary gray wolf algorithm (BGWOA), and binary manta-ray foraging algorithm (BMRFO). As the final contribution, from all experiments, this study has successfully revealed the superiority of BWOA-3 in solving the descriptors selection problem and improving the Amphetamine-type Stimulants (ATS) drug classification performance. Graphical abstract: [Figure not available: see fulltext.].

Original languageEnglish
Pages (from-to)71-80
Number of pages10
JournalMolecular diversity
Volume27
Issue number1
DOIs
Publication statusPublished - Feb 2023

Keywords

  • Binary whale optimization algorithm
  • Descriptors selection
  • Feature selection
  • Metaheuristic
  • Time-varying transfer function

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