TY - JOUR
T1 - Adversarial training with cycle consistency for unsupervised super-resolution in endomicroscopy
AU - Ravì, Daniele
AU - Szczotka, Agnieszka Barbara
AU - Pereira, Stephen P.
AU - Vercauteren, Tom
N1 - Funding Information:
Funding: This work was supported by Wellcome/EPSRC [ 203145Z/16/Z ; NS/A000050/1 ; WT101957 ; NS/A000027/1 ; EP/N027078/1 ]. This work was undertaken at UCL and UCLH, which receive a proportion of funding from the DoH NIHR UCLH BRC funding scheme. The PhD studentship of Agnieszka Barbara Szczotka is funded by Mauna Kea Technologies , Paris, France.
Publisher Copyright:
© 2019 The Authors
Copyright:
Copyright 2019 Elsevier B.V., All rights reserved.
PY - 2019/4
Y1 - 2019/4
N2 - In recent years, endomicroscopy has become increasingly used for diagnostic purposes and interventional guidance. It can provide intraoperative aids for real-time tissue characterization and can help to perform visual investigations aimed for example to discover epithelial cancers. Due to physical constraints on the acquisition process, endomicroscopy images, still today have a low number of informative pixels which hampers their quality. Post-processing techniques, such as Super-Resolution (SR), are a potential solution to increase the quality of these images. SR techniques are often supervised, requiring aligned pairs of low-resolution (LR) and high-resolution (HR) images patches to train a model. However, in our domain, the lack of HR images hinders the collection of such pairs and makes supervised training unsuitable. For this reason, we propose an unsupervised SR framework based on an adversarial deep neural network with a physically-inspired cycle consistency, designed to impose some acquisition properties on the super-resolved images. Our framework can exploit HR images, regardless of the domain where they are coming from, to transfer the quality of the HR images to the initial LR images. This property can be particularly useful in all situations where pairs of LR/HR are not available during the training. Our quantitative analysis, validated using a database of 238 endomicroscopy video sequences from 143 patients, shows the ability of the pipeline to produce convincing super-resolved images. A Mean Opinion Score (MOS) study also confirms this quantitative image quality assessment.
AB - In recent years, endomicroscopy has become increasingly used for diagnostic purposes and interventional guidance. It can provide intraoperative aids for real-time tissue characterization and can help to perform visual investigations aimed for example to discover epithelial cancers. Due to physical constraints on the acquisition process, endomicroscopy images, still today have a low number of informative pixels which hampers their quality. Post-processing techniques, such as Super-Resolution (SR), are a potential solution to increase the quality of these images. SR techniques are often supervised, requiring aligned pairs of low-resolution (LR) and high-resolution (HR) images patches to train a model. However, in our domain, the lack of HR images hinders the collection of such pairs and makes supervised training unsuitable. For this reason, we propose an unsupervised SR framework based on an adversarial deep neural network with a physically-inspired cycle consistency, designed to impose some acquisition properties on the super-resolved images. Our framework can exploit HR images, regardless of the domain where they are coming from, to transfer the quality of the HR images to the initial LR images. This property can be particularly useful in all situations where pairs of LR/HR are not available during the training. Our quantitative analysis, validated using a database of 238 endomicroscopy video sequences from 143 patients, shows the ability of the pipeline to produce convincing super-resolved images. A Mean Opinion Score (MOS) study also confirms this quantitative image quality assessment.
KW - Adversarial training
KW - Cycle consistency
KW - Deep learning
KW - Probe-based confocal laser endomicroscopy
KW - Unsupervised super-resolution
UR - http://www.scopus.com/inward/record.url?scp=85061339968&partnerID=8YFLogxK
U2 - 10.1016/j.media.2019.01.011
DO - 10.1016/j.media.2019.01.011
M3 - Article
C2 - 30769327
AN - SCOPUS:85061339968
SN - 1361-8415
VL - 53
SP - 123
EP - 131
JO - Medical Image Analysis
JF - Medical Image Analysis
ER -