TY - JOUR
T1 - An automated approach towards detecting complex behaviours in deep brain oscillations
AU - Mace, Michael
AU - Yousif, Nada
AU - Naushahi, Mohammad
AU - Abdullah-Al-Mamun, Khondaker
AU - Wang, Shouyan
AU - Nandi, Dipankar
AU - Vaidyanathan, Ravi
N1 - Michael Mace, et al, 'An automated approach towards detecting complex behaviours in deep brain oscillations', Journal of Neuroscience Methods, Vol. 224: 66-78, December 2013, doi: https://doi.org/10.1016/j.jneumeth.2013.11.019.
Published by Elsevier. Copyright © 2013 Elsevier B.V.
PY - 2014/3/15
Y1 - 2014/3/15
N2 - Extracting event-related potentials (ERPs) from neurological rhythms is of fundamental importance in neuroscience research. Standard ERP techniques typically require the associated ERP waveform to have low variance, be shape and latency invariant and require many repeated trials. Additionally, the non-ERP part of the signal needs to be sampled from an uncorrelated Gaussian process. This limits methods of analysis to quantifying simple behaviours and movements only when multi-trial data-sets are available. We introduce a method for automatically detecting events associated with complex or large-scale behaviours, where the ERP need not conform to the aforementioned requirements. The algorithm is based on the calculation of a detection contour and adaptive threshold. These are combined using logical operations to produce a binary signal indicating the presence (or absence) of an event with the associated detection parameters tuned using a multi-objective genetic algorithm. To validate the proposed methodology, deep brain signals were recorded from implanted electrodes in patients with Parkinson's disease as they participated in a large movement-based behavioural paradigm. The experiment involved bilateral recordings of local field potentials from the sub-thalamic nucleus (STN) and pedunculopontine nucleus (PPN) during an orientation task. After tuning, the algorithm is able to extract events achieving training set sensitivities and specificities of [87.5 ± 6.5, 76.7 ± 12.8, 90.0 ± 4.1] and [92.6 ± 6.3, 86.0 ± 9.0, 29.8 ± 12.3] (mean ± 1 std) for the three subjects, averaged across the four neural sites. Furthermore, the methodology has the potential for utility in real-time applications as only a single-trial ERP is required.
AB - Extracting event-related potentials (ERPs) from neurological rhythms is of fundamental importance in neuroscience research. Standard ERP techniques typically require the associated ERP waveform to have low variance, be shape and latency invariant and require many repeated trials. Additionally, the non-ERP part of the signal needs to be sampled from an uncorrelated Gaussian process. This limits methods of analysis to quantifying simple behaviours and movements only when multi-trial data-sets are available. We introduce a method for automatically detecting events associated with complex or large-scale behaviours, where the ERP need not conform to the aforementioned requirements. The algorithm is based on the calculation of a detection contour and adaptive threshold. These are combined using logical operations to produce a binary signal indicating the presence (or absence) of an event with the associated detection parameters tuned using a multi-objective genetic algorithm. To validate the proposed methodology, deep brain signals were recorded from implanted electrodes in patients with Parkinson's disease as they participated in a large movement-based behavioural paradigm. The experiment involved bilateral recordings of local field potentials from the sub-thalamic nucleus (STN) and pedunculopontine nucleus (PPN) during an orientation task. After tuning, the algorithm is able to extract events achieving training set sensitivities and specificities of [87.5 ± 6.5, 76.7 ± 12.8, 90.0 ± 4.1] and [92.6 ± 6.3, 86.0 ± 9.0, 29.8 ± 12.3] (mean ± 1 std) for the three subjects, averaged across the four neural sites. Furthermore, the methodology has the potential for utility in real-time applications as only a single-trial ERP is required.
KW - Algorithms
KW - Automatic Data Processing
KW - Behavior
KW - Brain
KW - Deep Brain Stimulation
KW - Electroencephalography
KW - Generalization (Psychology)
KW - Humans
KW - Movement
KW - Periodicity
U2 - 10.1016/j.jneumeth.2013.11.019
DO - 10.1016/j.jneumeth.2013.11.019
M3 - Article
C2 - 24370598
SN - 0165-0270
VL - 224
SP - 66
EP - 78
JO - Journal of Neuroscience Methods
JF - Journal of Neuroscience Methods
ER -