TY - JOUR
T1 - Fourier transform infrared spectral evaluation for the differentiation of clinically relevant Trichophyton species
AU - Ergin, Çaǧri
AU - Ilkit, Macit
AU - Gök, Yaşar
AU - Özel, Mustafa Zafer
AU - Çon, Ahmet Hilmi
AU - Kabay, Nilgün
AU - Söyleyici, Sevil
AU - Döǧen, Aylin
PY - 2013/6
Y1 - 2013/6
N2 - Routine mold identification methods have been established to provide actual data to facilitate reliable diagnoses in clinical laboratories, as well as the management of infection and health practice planning, particularly for dermatophytes. Some species of the Trichophyton genera, particularly T. rubrum and T. mentagrophytes complexes, exhibit more complexity in species recognition. In this study, the intriguing technique of Fourier-transform infrared (FT-IR) spectroscopy is evaluated for species recognition of Trichophyton spp. A total of 32 reference isolates, belonging to T. mentagrophytes (n. =. 7), T. rubrum (n. =. 21) complexes and Arthroderma spp. (n. =. 4), were included in the study. Numerous spectral window FTIR spectroscopy data were analyzed by principal component analysis and hierarchical clustering was performed. There were not any spectral ranges presenting clusters at the main Trichophyton species (e.g. T. rubrum, T. mentagrophytes and Arthroderma spp.). Notably, only T. violaceum (including T. yaoundei and T. soudanense) was clustered in several ranges. In intra-species evaluation, T. erinacei, belonging to the T. mentagrophytes complex, was distinguishable by FT-IR spectroscopy with different spectral range calculations. We suggested that further research with several reference and clinical isolates of Trichophyton species will be crucial to accurately identify intra-species of T. rubrum and T. mentagrophytes complexes.
AB - Routine mold identification methods have been established to provide actual data to facilitate reliable diagnoses in clinical laboratories, as well as the management of infection and health practice planning, particularly for dermatophytes. Some species of the Trichophyton genera, particularly T. rubrum and T. mentagrophytes complexes, exhibit more complexity in species recognition. In this study, the intriguing technique of Fourier-transform infrared (FT-IR) spectroscopy is evaluated for species recognition of Trichophyton spp. A total of 32 reference isolates, belonging to T. mentagrophytes (n. =. 7), T. rubrum (n. =. 21) complexes and Arthroderma spp. (n. =. 4), were included in the study. Numerous spectral window FTIR spectroscopy data were analyzed by principal component analysis and hierarchical clustering was performed. There were not any spectral ranges presenting clusters at the main Trichophyton species (e.g. T. rubrum, T. mentagrophytes and Arthroderma spp.). Notably, only T. violaceum (including T. yaoundei and T. soudanense) was clustered in several ranges. In intra-species evaluation, T. erinacei, belonging to the T. mentagrophytes complex, was distinguishable by FT-IR spectroscopy with different spectral range calculations. We suggested that further research with several reference and clinical isolates of Trichophyton species will be crucial to accurately identify intra-species of T. rubrum and T. mentagrophytes complexes.
KW - Dermatophytes
KW - Fourier Transform Infrared Spectroscopy
KW - Trichophyton mentagrophytes
KW - Trichophyton rubrum
UR - http://www.scopus.com/inward/record.url?scp=84876830003&partnerID=8YFLogxK
U2 - 10.1016/j.mimet.2013.03.011
DO - 10.1016/j.mimet.2013.03.011
M3 - Article
C2 - 23538126
AN - SCOPUS:84876830003
SN - 0167-7012
VL - 93
SP - 218
EP - 223
JO - Journal of Microbiological Methods
JF - Journal of Microbiological Methods
IS - 3
ER -