Human-Mouse Gene Searcher: a tool to assist discovery of malformation-associated genes by using phenotype databases

Ian Bradford; Robin Winter; Carl Evans; Jonathan Bard

doi:10.1093/bioinformatics/bti017

Human-Mouse Gene Searcher: a tool to assist discovery of malformation-associated genes by using phenotype databases

Ian Bradford
, Robin Winter
, Carl Evans
, Jonathan Bard

Research output: Contribution to journal › Article › peer-review

2 Citations (Scopus)

Abstract

UNLABELLED: An open-access World Wide Web application has been developed which enables the cross-linking of anatomical data on the phenotypic manifestations of human and mouse malformation syndromes to data on gene function and/or expression patterns in the mouse GXD database. Ultimately, the system has been designed to assist biologists in the process of discovering hitherto unidentified malformation genes. More specifically, it facilitates search from the phenotypic level.

AVAILABILITY: The application and further information is available at http://genetics.ich.ucl.ac.uk/linksearchtool.

Original language	English
Pages (from-to)	408-9
Number of pages	2
Journal	Bioinformatics
Volume	21
Issue number	3
DOIs	https://doi.org/10.1093/bioinformatics/bti017
Publication status	Published - 1 Feb 2005

Keywords

Animals
Computer Graphics
Congenital Abnormalities
DNA Mutational Analysis
Database Management Systems
Databases, Genetic
Gene Expression Profiling
Humans
Information Storage and Retrieval
Internet
Mice
Phenotype
Software
User-Computer Interface

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10.1093/bioinformatics/bti017

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title = "Human-Mouse Gene Searcher: a tool to assist discovery of malformation-associated genes by using phenotype databases",

abstract = "UNLABELLED: An open-access World Wide Web application has been developed which enables the cross-linking of anatomical data on the phenotypic manifestations of human and mouse malformation syndromes to data on gene function and/or expression patterns in the mouse GXD database. Ultimately, the system has been designed to assist biologists in the process of discovering hitherto unidentified malformation genes. More specifically, it facilitates search from the phenotypic level.AVAILABILITY: The application and further information is available at http://genetics.ich.ucl.ac.uk/linksearchtool.",

keywords = "Animals, Computer Graphics, Congenital Abnormalities, DNA Mutational Analysis, Database Management Systems, Databases, Genetic, Gene Expression Profiling, Humans, Information Storage and Retrieval, Internet, Mice, Phenotype, Software, User-Computer Interface",

author = "Ian Bradford and Robin Winter and Carl Evans and Jonathan Bard",

year = "2005",

month = feb,

day = "1",

doi = "10.1093/bioinformatics/bti017",

language = "English",

volume = "21",

pages = "408--9",

journal = "Bioinformatics",

issn = "1367-4803",

publisher = "Oxford University Press (OUP)",

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TY - JOUR

T1 - Human-Mouse Gene Searcher

T2 - a tool to assist discovery of malformation-associated genes by using phenotype databases

AU - Bradford, Ian

AU - Winter, Robin

AU - Evans, Carl

AU - Bard, Jonathan

PY - 2005/2/1

Y1 - 2005/2/1

N2 - UNLABELLED: An open-access World Wide Web application has been developed which enables the cross-linking of anatomical data on the phenotypic manifestations of human and mouse malformation syndromes to data on gene function and/or expression patterns in the mouse GXD database. Ultimately, the system has been designed to assist biologists in the process of discovering hitherto unidentified malformation genes. More specifically, it facilitates search from the phenotypic level.AVAILABILITY: The application and further information is available at http://genetics.ich.ucl.ac.uk/linksearchtool.

AB - UNLABELLED: An open-access World Wide Web application has been developed which enables the cross-linking of anatomical data on the phenotypic manifestations of human and mouse malformation syndromes to data on gene function and/or expression patterns in the mouse GXD database. Ultimately, the system has been designed to assist biologists in the process of discovering hitherto unidentified malformation genes. More specifically, it facilitates search from the phenotypic level.AVAILABILITY: The application and further information is available at http://genetics.ich.ucl.ac.uk/linksearchtool.

KW - Animals

KW - Computer Graphics

KW - Congenital Abnormalities

KW - DNA Mutational Analysis

KW - Database Management Systems

KW - Databases, Genetic

KW - Gene Expression Profiling

KW - Humans

KW - Information Storage and Retrieval

KW - Internet

KW - Mice

KW - Phenotype

KW - Software

KW - User-Computer Interface

U2 - 10.1093/bioinformatics/bti017

DO - 10.1093/bioinformatics/bti017

M3 - Article

C2 - 15358615

SN - 1367-4803

VL - 21

SP - 408

EP - 409

JO - Bioinformatics

JF - Bioinformatics

IS - 3

ER -

Human-Mouse Gene Searcher: a tool to assist discovery of malformation-associated genes by using phenotype databases

Abstract

Keywords

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