Sequence determination of a satellite RNA isolated from Aspergillus foetidus

Unnati Shah; I. Kotta-Loizou; Robert H.A. Coutts

doi:10.1007/s00705-015-2338-x

Sequence determination of a satellite RNA isolated from Aspergillus foetidus

Unnati Shah, I. Kotta-Loizou, Robert H.A. Coutts

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Abstract

Aspergillus foetidus virus (AfV) has at least two distinct particle types, designated as AfV-fast (F) and AfV-slow (S). AfV-S includes AfV-S1, a victorivirus; AfV-S2, an unclassified satellite RNA; and AfV-S3, a previously uncharacterized dsRNA element. Here, we describe the complete sequence of AfV-S3, which is a short non-coding RNA with no known homologs. AfV-S3 is predicted to form an extended secondary structure, shares a 5’ terminus with AfV-S2, and is a satellite RNA possibly dependent on both AfV-S1 and AfV-S2. This work concludes the sequencing of the A. foetidus virome

Original language	English
Pages (from-to)	883-885
Journal	Archives of Virology
Volume	160
Issue number	3
Early online date	23 Jan 2015
DOIs	https://doi.org/10.1007/s00705-015-2338-x
Publication status	Published - Mar 2015

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title = "Sequence determination of a satellite RNA isolated from Aspergillus foetidus",

abstract = "Aspergillus foetidus virus (AfV) has at least two distinct particle types, designated as AfV-fast (F) and AfV-slow (S). AfV-S includes AfV-S1, a victorivirus; AfV-S2, an unclassified satellite RNA; and AfV-S3, a previously uncharacterized dsRNA element. Here, we describe the complete sequence of AfV-S3, which is a short non-coding RNA with no known homologs. AfV-S3 is predicted to form an extended secondary structure, shares a 5{\textquoteright} terminus with AfV-S2, and is a satellite RNA possibly dependent on both AfV-S1 and AfV-S2. This work concludes the sequencing of the A. foetidus virome",

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AU - Kotta-Loizou, I.

AU - Coutts, Robert H.A.

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AB - Aspergillus foetidus virus (AfV) has at least two distinct particle types, designated as AfV-fast (F) and AfV-slow (S). AfV-S includes AfV-S1, a victorivirus; AfV-S2, an unclassified satellite RNA; and AfV-S3, a previously uncharacterized dsRNA element. Here, we describe the complete sequence of AfV-S3, which is a short non-coding RNA with no known homologs. AfV-S3 is predicted to form an extended secondary structure, shares a 5’ terminus with AfV-S2, and is a satellite RNA possibly dependent on both AfV-S1 and AfV-S2. This work concludes the sequencing of the A. foetidus virome

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JO - Archives of Virology

JF - Archives of Virology

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Sequence determination of a satellite RNA isolated from Aspergillus foetidus

Abstract

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